Sequence Similarity Clusters for the Entities in PDB 1PP9

Entity #1 | Chains: A,N
Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1234
95 % 3 28 1286
90 % 3 29 1236
70 % 3 46 666
50 % 3 46 711
40 % 3 46 747
30 % 4 54 637
Entity #10 | Chains: J,W
Ubiquinol-cytochrome C reductase complex 7.2 kDa protein protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 26 980
95 % 3 31 1132
90 % 3 31 1161
70 % 3 45 685
50 % 3 45 730
40 % 3 45 766
30 % 3 45 758
Entity #2 | Chains: B,O
Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 24 1237
95 % 3 29 1288
90 % 3 33 1130
70 % 3 47 667
50 % 3 47 713
40 % 3 47 749
30 % 3 47 739
Entity #3 | Chains: C,P
Cytochrome b protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 24 1124
95 % 3 24 1549
90 % 3 28 1240
70 % 3 45 668
50 % 4 53 598
40 % 4 61 454
30 % 4 61 450
Entity #4 | Chains: D,Q
Cytochrome c1, heme protein, mitochondrial protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 25 1034
95 % 3 28 1300
90 % 3 28 1319
70 % 3 42 754
50 % 4 50 651
40 % 4 50 684
30 % 4 58 473
Entity #5 | Chains: E,R
Ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 1536
95 % 3 24 1563
90 % 3 27 1450
70 % 3 41 810
50 % 4 49 682
40 % 4 57 487
30 % 4 57 488
Entity #6 | Chains: F,S
Ubiquinol-cytochrome C reductase complex 14 kDa protein protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1258
95 % 3 28 1228
90 % 3 31 1155
70 % 3 45 682
50 % 3 45 725
40 % 3 45 761
30 % 3 45 754
Entity #7 | Chains: G,T
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1225
95 % 3 28 1230
90 % 3 31 1159
70 % 3 31 1197
50 % 3 45 729
40 % 3 45 765
30 % 3 45 757
Entity #8 | Chains: H,U
Ubiquinol-cytochrome C reductase complex 11 kDa protein protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 1502
95 % 3 24 1723
90 % 3 38 849
70 % 3 41 794
50 % 3 41 840
40 % 3 41 867
30 % 3 41 854
Entity #9 | Chains: I,V
Ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 15 2435
95 % 3 16 2723
90 % 3 17 2521
70 % 3 17 2505
50 % 3 19 2045
40 % 3 19 2050
30 % 3 19 1960

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.