Sequence Similarity Clusters for the Entities in PDB 1PP6

Entity #1 | Chains: A,B,C,D,E
Volvatoxin A2 protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5785
95 % 4 4 5853 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 4 4 5863
70 % 4 4 5728
50 % 4 4 5388
40 % 4 4 5070
30 % 4 4 4576

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures