Sequence Similarity Clusters for the Entities in PDB 1PP6

Entity #1 | Chains: A,B,C,D,E
Volvatoxin A2 protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6530
95 % 4 4 5793 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 4 4 5808
70 % 4 4 5676
50 % 4 4 5357
40 % 4 4 5002
30 % 4 4 4461

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures