Sequence Similarity Clusters for the Entities in PDB 1PP4

Entity #1 | Chains: A,B
Rhamnogalacturonan acetylesterase protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 15094
95 % 5 5 12203 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 5 12036
70 % 5 5 11372
50 % 5 5 10166
40 % 5 5 9226
30 % 5 5 8044

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1K7C 1 A rhamnogalacturonan acetylesterase 5053 3.1.1.86 | Details
2 3C1U 1 A Rhamnogalacturonan acetylesterase 5053 3.1.1.86 | Details
3 1DEO 1 A RHAMNOGALACTURONAN ACETYLESTERASE 5053 3.1.1.86 | Details
4 1DEX 1 A RHAMNOGALACTURONAN ACETYLESTERASE 5053 3.1.1.86 | Details
5 1PP4 1 A, B Rhamnogalacturonan acetylesterase 5053 3.1.1.86 | Details