Sequence Similarity Clusters for the Entities in PDB 1PP4

Entity #1 | Chains: A,B
Rhamnogalacturonan acetylesterase protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 14253
95 % 5 5 13378 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 5 5 13152
70 % 5 5 12352
50 % 5 5 10989
40 % 5 5 9891
30 % 5 5 8452

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures