Sequence Similarity Clusters for the Entities in PDB 1PP4

Entity #1 | Chains: A,B
Rhamnogalacturonan acetylesterase protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 14763
95 % 5 5 11924 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 5 11751
70 % 5 5 11082
50 % 5 5 9936
40 % 5 5 9015
30 % 5 5 7853

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.