Sequence Similarity Clusters for the Entities in PDB 1PP4

Entity #1 | Chains: A,B
Rhamnogalacturonan acetylesterase protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 15238
95 % 5 5 12312 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 5 5 12137
70 % 5 5 11454
50 % 5 5 10242
40 % 5 5 9293
30 % 5 5 8103

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.