Sequence Similarity Clusters for the Entities in PDB 1POV

Entity #1 | Chains: 0
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52836
95 % 1 1 38170
90 % 1 1 36517
70 % 1 1 32543
50 % 5 11 1794
40 % 5 11 1807
30 % 5 11 1747
Entity #2 | Chains: 1
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 21 2170
95 % 9 25 2219 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 9 25 2288
70 % 12 34 1577
50 % 17 40 1380
40 % 56 149 283
30 % 56 149 289
Entity #3 | Chains: 3
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 31 1266
95 % 9 31 1711
90 % 9 31 1744
70 % 17 46 1145
50 % 56 158 249
40 % 56 160 264
30 % 72 197 151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.