Sequence Similarity Clusters for the Entities in PDB 1POV

Entity #1 | Chains: 0
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53581
95 % 1 1 38706
90 % 1 1 37012
70 % 1 1 32982
50 % 5 11 1821
40 % 5 11 1833
30 % 5 11 1771
Entity #2 | Chains: 1
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 21 2215
95 % 9 25 2271
90 % 9 25 2336
70 % 12 36 1498
50 % 17 42 1321
40 % 56 155 276
30 % 56 155 284
Entity #3 | Chains: 3
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 31 1298
95 % 9 31 1755 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 9 31 1789
70 % 17 48 1115
50 % 56 164 241
40 % 56 166 257
30 % 72 203 149

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.