Sequence Similarity Clusters for the Entities in PDB 1POT

Entity #1 | Chains: A
SPERMIDINE/PUTRESCINE-BINDING PROTEIN protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14718
95 % 1 2 13923 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 13703
70 % 1 2 12907
50 % 1 2 11479
40 % 3 4 6984
30 % 4 11 2442

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.