Sequence Similarity Clusters for the Entities in PDB 1POT

Entity #1 | Chains: A
SPERMIDINE/PUTRESCINE-BINDING PROTEIN protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15079
95 % 1 2 14236 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 14014
70 % 1 2 13189
50 % 1 2 11730
40 % 3 4 7128
30 % 4 11 2492

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures