Sequence Similarity Clusters for the Entities in PDB 1POP

Entity #1 | Chains: A
PAPAIN protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 16 3456
95 % 19 24 2320
90 % 19 24 2385
70 % 19 24 2386
50 % 190 195 142
40 % 230 235 125
30 % 269 274 116
Entity #2 | Chains: B
LEUPEPTIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures