Sequence Similarity Clusters for the Entities in PDB 1POP

Entity #1 | Chains: A
PAPAIN protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 16 3515
95 % 19 24 2368
90 % 19 24 2436
70 % 19 24 2441
50 % 193 198 142
40 % 236 241 124
30 % 275 280 115
Entity #2 | Chains: B
LEUPEPTIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures