Sequence Similarity Clusters for the Entities in PDB 1PO2

Entity #1 | Chains: 0
POLIOVIRUS TYPE 1 MAHONEY protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 1 MAHONEY protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 21 2295
95 % 7 25 2332 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 7 25 2396
70 % 9 36 1536
50 % 13 42 1353
40 % 45 159 275
30 % 45 159 284
Entity #3 | Chains: 2
POLIOVIRUS TYPE 1 MAHONEY protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 1473
95 % 7 31 1797 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 31 1833
70 % 13 48 1142
50 % 43 159 307
40 % 43 159 319
30 % 57 194 165
Entity #4 | Chains: 3
POLIOVIRUS TYPE 1 MAHONEY protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 31 1344
95 % 7 31 1801 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 7 31 1836
70 % 13 48 1145
50 % 45 168 242
40 % 45 170 260
30 % 60 209 147
Entity #5 | Chains: 4
POLIOVIRUS TYPE 1 MAHONEY protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 21 2359
95 % 8 23 2736 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 9 33 1720
70 % 19 87 567
50 % 38 122 435
40 % 39 123 462
30 % 39 123 459

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.