Sequence Similarity Clusters for the Entities in PDB 1PO2

Entity #1 | Chains: 0
POLIOVIRUS TYPE 1 MAHONEY protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 1 MAHONEY protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 21 2246
95 % 7 25 2299 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 7 25 2362
70 % 9 36 1517
50 % 13 42 1334
40 % 44 158 274
30 % 44 158 282
Entity #3 | Chains: 2
POLIOVIRUS TYPE 1 MAHONEY protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 1444
95 % 7 31 1774 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 7 31 1809
70 % 13 48 1125
50 % 42 159 294
40 % 42 159 310
30 % 56 194 165
Entity #4 | Chains: 3
POLIOVIRUS TYPE 1 MAHONEY protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 31 1315
95 % 7 31 1778 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 7 31 1812
70 % 13 48 1128
50 % 44 167 239
40 % 44 169 255
30 % 59 208 146
Entity #5 | Chains: 4
POLIOVIRUS TYPE 1 MAHONEY protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 21 2311
95 % 8 23 2686 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 9 33 1697
70 % 19 87 558
50 % 37 122 428
40 % 38 123 455
30 % 38 123 454

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.