Sequence Similarity Clusters for the Entities in PDB 1PO2

Entity #1 | Chains: 0
POLIOVIRUS TYPE 1 MAHONEY protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 1 MAHONEY protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 21 2216
95 % 7 25 2272
90 % 7 25 2337
70 % 9 36 1500
50 % 13 42 1324
40 % 45 155 276
30 % 45 155 284
Entity #3 | Chains: 2
POLIOVIRUS TYPE 1 MAHONEY protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 1427
95 % 7 31 1754 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 31 1788
70 % 13 48 1113
50 % 43 157 295
40 % 43 157 309
30 % 57 192 180
Entity #4 | Chains: 3
POLIOVIRUS TYPE 1 MAHONEY protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 31 1300
95 % 7 31 1758 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 7 31 1791
70 % 13 48 1116
50 % 45 164 241
40 % 45 166 258
30 % 60 203 157
Entity #5 | Chains: 4
POLIOVIRUS TYPE 1 MAHONEY protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 21 2280
95 % 8 23 2654 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 9 33 1675
70 % 19 87 551
50 % 38 122 421
40 % 39 123 446
30 % 39 123 446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.