Sequence Similarity Clusters for the Entities in PDB 1PO1

Entity #1 | Chains: 0
POLIOVIRUS TYPE 1 MAHONEY protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 1 MAHONEY protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 21 2215
95 % 5 25 2271 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 5 25 2336
70 % 7 36 1498
50 % 11 42 1321
40 % 40 155 276
30 % 40 155 284
Entity #3 | Chains: 2
POLIOVIRUS TYPE 1 MAHONEY protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 29 1426
95 % 5 31 1751 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 31 1786
70 % 11 48 1112
50 % 39 157 295
40 % 39 157 309
30 % 52 192 164
Entity #4 | Chains: 3
POLIOVIRUS TYPE 1 MAHONEY protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 31 1298
95 % 5 31 1755 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 5 31 1789
70 % 11 48 1115
50 % 40 164 241
40 % 40 166 257
30 % 54 203 149
Entity #5 | Chains: 4
POLIOVIRUS TYPE 1 MAHONEY protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 21 2278
95 % 6 23 2653 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 7 33 1673
70 % 16 87 551
50 % 34 122 423
40 % 35 123 447
30 % 35 123 446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.