Sequence Similarity Clusters for the Entities in PDB 1PNQ

Entity #1 | Chains: A,B
NAD(P) transhydrogenase subunit beta protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 6788
95 % 2 6 7401 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 2 6 7371
70 % 2 6 7161
50 % 5 10 4378
40 % 5 10 4167
30 % 5 10 3849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures