Sequence Similarity Clusters for the Entities in PDB 1PNQ

Entity #1 | Chains: A,B
NAD(P) transhydrogenase subunit beta protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 6574
95 % 2 6 7172 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 2 6 7139
70 % 2 6 6950
50 % 5 10 4250
40 % 5 10 4057
30 % 5 10 3743

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.