Sequence Similarity Clusters for the Entities in PDB 1PNQ

Entity #1 | Chains: A,B
NAD(P) transhydrogenase subunit beta protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 6697
95 % 2 6 7303 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 2 6 7271
70 % 2 6 7067
50 % 5 10 4320
40 % 5 10 4123
30 % 5 10 3804

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures