Sequence Similarity Clusters for the Entities in PDB 1PNO

Entity #1 | Chains: A,B
NAD(P) transhydrogenase subunit beta protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 6580
95 % 1 6 7178 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 1 6 7144
70 % 1 6 6956
50 % 2 10 4255
40 % 2 10 4061
30 % 2 10 3749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures