Sequence Similarity Clusters for the Entities in PDB 1PND

Entity #1 | Chains: A
PLASTOCYANIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 15 3831
95 % 10 16 3906 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 10 16 3951
70 % 13 33 1523
50 % 18 58 738
40 % 18 65 686
30 % 18 65 676

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures