Sequence Similarity Clusters for the Entities in PDB 1PNB

Entity #1 | Chains: A
NAPIN BNIB protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48711
95 % 1 1 40359
90 % 1 1 38462
70 % 1 1 34037
50 % 1 1 28913
40 % 1 1 25363
30 % 1 1 21132
Entity #2 | Chains: B
NAPIN BNIB protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66920
95 % 1 1 49729
90 % 1 1 47182
70 % 1 1 41371
50 % 1 1 35101
40 % 1 1 30758
30 % 1 1 21133

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures