Sequence Similarity Clusters for the Entities in PDB 1PN7

Entity #1 | Chains: C
P-tRNA rna, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: O
30S ribosomal protein S12 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 217 50
95 % 268 276 39
90 % 268 276 43
70 % 394 404 22
50 % 399 409 25
40 % 399 409 35
30 % 399 409 55
Entity #3 | Chains: L
50S ribosomal protein L11 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 19 2382
95 % 11 21 2685
90 % 11 21 2730
70 % 14 24 2268
50 % 205 217 140
40 % 208 220 152
30 % 211 223 167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.