Sequence Similarity Clusters for the Entities in PDB 1PN7

Entity #1 | Chains: C
P-tRNA rna, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: O
30S ribosomal protein S12 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 199 207 47
95 % 254 262 36
90 % 254 262 41
70 % 356 366 21
50 % 357 367 27
40 % 357 367 37
30 % 357 367 57
Entity #3 | Chains: L
50S ribosomal protein L11 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 19 2212
95 % 11 21 2470
90 % 11 21 2513
70 % 14 24 2097
50 % 186 198 141
40 % 189 201 155
30 % 192 204 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.