Sequence Similarity Clusters for the Entities in PDB 1PN7

Entity #1 | Chains: C
P-tRNA rna, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: O
30S ribosomal protein S12 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 255 263 49
95 % 294 302 37
90 % 294 302 41
70 % 462 472 15
50 % 465 475 24
40 % 465 475 38
30 % 465 475 55
Entity #3 | Chains: L
50S ribosomal protein L11 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 21 2555
95 % 11 21 2869
90 % 11 21 2927
70 % 14 24 2499
50 % 226 238 151
40 % 229 241 161
30 % 232 244 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures