Sequence Similarity Clusters for the Entities in PDB 1PN7

Entity #1 | Chains: C
P-tRNA rna, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: O
30S ribosomal protein S12 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 210 218 54
95 % 271 279 39
90 % 271 279 44
70 % 420 430 18
50 % 433 443 24
40 % 433 443 38
30 % 433 443 57
Entity #3 | Chains: L
50S ribosomal protein L11 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 19 2590
95 % 11 21 2878
90 % 11 21 2919
70 % 14 24 2425
50 % 217 229 146
40 % 220 232 155
30 % 223 235 166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures