Sequence Similarity Clusters for the Entities in PDB 1PN7

Entity #1 | Chains: C
P-tRNA rna, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: O
30S ribosomal protein S12 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 217 52
95 % 270 278 39
90 % 270 278 44
70 % 416 426 18
50 % 429 439 24
40 % 429 439 36
30 % 429 439 56
Entity #3 | Chains: L
50S ribosomal protein L11 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 19 2525
95 % 11 21 2826
90 % 11 21 2867
70 % 14 24 2383
50 % 217 229 141
40 % 220 232 153
30 % 223 235 166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.