Sequence Similarity Clusters for the Entities in PDB 1PMO

Entity #1 | Chains: A,B,C,D,E,F
Glutamate decarboxylase beta protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 754
95 % 6 9 1003 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.1
PDBFlex
90 % 6 9 1029
70 % 6 9 1058
50 % 6 9 1103
40 % 7 10 1064
30 % 7 10 1042

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.