Sequence Similarity Clusters for the Entities in PDB 1PMM

Entity #1 | Chains: A,B,C,D,E,F
Glutamate decarboxylase beta protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 777
95 % 2 9 1030 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.1
PDBFlex
90 % 2 9 1059
70 % 2 9 1091
50 % 2 9 1139
40 % 2 10 1098
30 % 2 10 1078

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures