Sequence Similarity Clusters for the Entities in PDB 1PMM

Entity #1 | Chains: A,B,C,D,E,F
Glutamate decarboxylase beta protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 756
95 % 2 9 1003 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.1
PDBFlex
90 % 2 9 1029
70 % 2 9 1058
50 % 2 9 1104
40 % 2 10 1063
30 % 2 10 1043

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.