Sequence Similarity Clusters for the Entities in PDB 1PMJ

Entity #1 | Chains: X
beta-1,4-mannanase protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40938
95 % 2 2 31047 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 29729
70 % 2 2 26643
50 % 2 2 22792
40 % 2 2 20055
30 % 2 2 16977

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.