Sequence Similarity Clusters for the Entities in PDB 1PMD

Entity #1 | Chains: A
PEPTIDOGLYCAN SYNTHESIS MULTIFUNCTIONAL ENZYME protein, length: 675 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 24998
95 % 5 5 11004 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.5
PDBFlex
90 % 5 5 10857
70 % 6 6 6398
50 % 7 7 5648
40 % 7 7 5308
30 % 7 7 4765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.