Sequence Similarity Clusters for the Entities in PDB 1PM9

Entity #1 | Chains: A,B
Superoxide dismutase [Mn], mitochondrial protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41750
95 % 4 30 735 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 30 767
70 % 4 30 818
50 % 38 116 139
40 % 43 130 124
30 % 43 133 132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2P4K 1 A, B, C, D Superoxide dismutase 9606 1.15.1.1 | Details
2 1XIL 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
3 1PL4 1 A, B, C, D Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
4 1PM9 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
5 5VF9 1 A, B Superoxide dismutase [Mn], mitochondrial UNP residues 25-222 9606 1.15.1.1 | Details
6 5T30 1 A, B Superoxide dismutase [Mn], mitochondrial UNP residues 25-222 9606 1.15.1.1 | Details
7 1AP6 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
8 1ZTE 1 A, B, C, D Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
9 1XDC 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
10 1N0N 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
11 1ZSP 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
12 1LUV 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
13 1N0J 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
14 3C3T 1 A, B Superoxide dismutase [Mn] UNP residues 25-222 9606 1.15.1.1 | Details
15 1SZX 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
16 1ZUQ 1 A, B Superoxide dismutase 9606 1.15.1.1 | Details
17 2QKA 1 A, C Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
18 1AP5 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
19 1EM1 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
20 2QKC 1 A, C Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
21 2GDS 1 A, B, C, D Superoxide dismutase 9606 1.15.1.1 | Details
22 1QNM 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
23 1VAR 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
24 1JA8 1 A, B Manganese Superoxide Dismutase 9606 1.15.1.1 | Details
25 3C3S 1 A, B Superoxide dismutase [Mn] UNP residues 25-222 9606 1.15.1.1 | Details
26 5GXO 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
27 2ADP 1 A Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
28 2ADQ 1 B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
29 1LUW 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
30 1MSD 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details