Sequence Similarity Clusters for the Entities in PDB 1PM9

Entity #1 | Chains: A,B
Superoxide dismutase [Mn], mitochondrial protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42638
95 % 4 30 753 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 30 783
70 % 4 30 827
50 % 40 118 145
40 % 45 132 128
30 % 45 135 133

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2P4K 1 A, B, C, D Superoxide dismutase 9606 1.15.1.1 | Details
2 1XIL 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
3 1PL4 1 A, B, C, D Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
4 1PM9 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
5 5VF9 1 A, B Superoxide dismutase [Mn], mitochondrial UNP residues 25-222 9606 1.15.1.1 | Details
6 5T30 1 A, B Superoxide dismutase [Mn], mitochondrial UNP residues 25-222 9606 1.15.1.1 | Details
7 1AP6 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
8 1ZTE 1 A, B, C, D Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
9 1XDC 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
10 1N0N 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
11 1ZSP 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
12 1LUV 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
13 1N0J 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
14 3C3T 1 A, B Superoxide dismutase [Mn] UNP residues 25-222 9606 1.15.1.1 | Details
15 1SZX 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
16 1ZUQ 1 A, B Superoxide dismutase 9606 1.15.1.1 | Details
17 2QKA 1 A, C Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
18 1AP5 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
19 1EM1 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
20 2QKC 1 A, C Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
21 2GDS 1 A, B, C, D Superoxide dismutase 9606 1.15.1.1 | Details
22 1QNM 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
23 1VAR 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details
24 1JA8 1 A, B Manganese Superoxide Dismutase 9606 1.15.1.1 | Details
25 3C3S 1 A, B Superoxide dismutase [Mn] UNP residues 25-222 9606 1.15.1.1 | Details
26 5GXO 1 A, B Superoxide dismutase [Mn], mitochondrial 9606 1.15.1.1 | Details
27 2ADP 1 A Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
28 2ADQ 1 B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
29 1LUW 1 A, B Superoxide dismutase [Mn] 9606 1.15.1.1 | Details
30 1MSD 1 A, B MANGANESE SUPEROXIDE DISMUTASE 9606 1.15.1.1 | Details