Sequence Similarity Clusters for the Entities in PDB 1PM4

Entity #1 | Chains: A,B,C
YPM protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23521
95 % 1 2 20133 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 19587
70 % 1 2 17999
50 % 1 2 15636
40 % 1 2 13932
30 % 1 2 11923

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.