Sequence Similarity Clusters for the Entities in PDB 1PM4

Entity #1 | Chains: A,B,C
YPM protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23902
95 % 1 2 20437 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 19873
70 % 1 2 18281
50 % 1 2 15867
40 % 1 2 14129
30 % 1 2 12094

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures