Sequence Similarity Clusters for the Entities in PDB 1PM1

Entity #1 | Chains: X
Nitrophorin 2 protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28260
95 % 1 14 4825 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 14 4845
70 % 1 14 4729
50 % 1 20 3099
40 % 23 74 689
30 % 23 77 567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.