Sequence Similarity Clusters for the Entities in PDB 1PLQ

Entity #1 | Chains: A
PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 4368
95 % 1 16 2283 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.5
PDBFlex
90 % 1 16 2349
70 % 1 16 2349
50 % 1 16 2333
40 % 11 53 337
30 % 22 86 232

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures