Sequence Similarity Clusters for the Entities in PDB 1PLQ

Entity #1 | Chains: A
PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 6002
95 % 2 22 1839 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.5
PDBFlex
90 % 2 22 1878
70 % 2 22 1894
50 % 2 22 1922
40 % 12 60 337
30 % 24 102 229

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures