1PLG

EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID


Sequence Similarity Clusters for the Entities in PDB 1PLG

Entity #1 | Chains: L
IGG2A=KAPPA= protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58889
95 % 95 145 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 103 155 149
70 % 938 1841 2
50 % 2317 4537 1
40 % 2317 4537 1
30 % 2641 5342 1
Entity #2 | Chains: H
IGG2A=KAPPA= protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58888
95 % 1 1 41260
90 % 1 5 5604
70 % 1126 2197 1
50 % 2318 4537 1
40 % 2318 4537 1
30 % 2642 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.