1PLG

EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID


Sequence Similarity Clusters for the Entities in PDB 1PLG

Entity #1 | Chains: L
IGG2A=KAPPA= protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62540
95 % 95 148 151 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 103 158 148
70 % 1261 2474 1
50 % 2577 5011 1
40 % 2577 5011 1
30 % 2972 5941 1
Entity #2 | Chains: H
IGG2A=KAPPA= protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62539
95 % 1 1 43782
90 % 1 5 6028
70 % 1250 2424 2
50 % 2578 5011 1
40 % 2578 5011 1
30 % 2973 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures