Sequence Similarity Clusters for the Entities in PDB 1PLF

Entity #1 | Chains: A,B,C,D
PLATELET FACTOR 4 protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23936
95 % 1 1 21265 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 1 20630
70 % 3 11 1256
50 % 7 21 832
40 % 11 34 634
30 % 15 54 462

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures