Sequence Similarity Clusters for the Entities in PDB 1PKR

Entity #1 | Chains: A
PLASMINOGEN protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 10249
95 % 4 6 10261 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 4 6 10135
70 % 4 6 9622
50 % 18 25 1988
40 % 19 31 1441
30 % 19 31 1425

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures