Sequence Similarity Clusters for the Entities in PDB 1PKO

Entity #1 | Chains: A
Myelin Oligodendrocyte Glycoprotein protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28891
95 % 1 3 19749 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 1 3 19216
70 % 1 3 17695
50 % 1 3 15373
40 % 1 7 7565
30 % 1 7 6674

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.