Sequence Similarity Clusters for the Entities in PDB 1PKM

Entity #1 | Chains: A
M1 PYRUVATE KINASE protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50222
95 % 20 37 214 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.5
PDBFlex
90 % 20 37 224
70 % 22 43 182
50 % 36 68 144
40 % 40 77 140
30 % 40 77 155

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.