Sequence Similarity Clusters for the Entities in PDB 1PKM

Entity #1 | Chains: A
M1 PYRUVATE KINASE protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52998
95 % 21 39 223 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 21 39 233
70 % 23 45 193
50 % 37 70 162
40 % 44 85 143
30 % 44 85 150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures