Sequence Similarity Clusters for the Entities in PDB 1PKJ

Entity #1 | Chains: A,B
Bifunctional deaminase/diphosphatase protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7554
95 % 4 7 6633 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.7
PDBFlex
90 % 4 7 6625
70 % 4 7 6454
50 % 4 7 6035
40 % 4 7 5643
30 % 6 16 918

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures