Sequence Similarity Clusters for the Entities in PDB 1PKJ

Entity #1 | Chains: A,B
Bifunctional deaminase/diphosphatase protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7441
95 % 4 7 6543 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.7
PDBFlex
90 % 4 7 6526
70 % 4 7 6365
50 % 4 7 5957
40 % 4 7 5576
30 % 6 16 913

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures