Sequence Similarity Clusters for the Entities in PDB 1PKG

Entity #1 | Chains: A,B
c-kit protein protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 11708
95 % 7 7 7433 Flexibility: Medium
Max RMSD: 5.8, Avg RMSD: 3.3
PDBFlex
90 % 7 7 7389
70 % 7 7 7175
50 % 133 141 190
40 % 984 1050 6
30 % 3480 3777 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.