Sequence Similarity Clusters for the Entities in PDB 1PKG

Entity #1 | Chains: A,B
c-kit protein protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 12468
95 % 7 7 7907 Flexibility: Medium
Max RMSD: 5.8, Avg RMSD: 3.5
PDBFlex
90 % 7 7 7848
70 % 7 7 7631
50 % 137 147 201
40 % 1014 1087 6
30 % 3764 4073 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures