Sequence Similarity Clusters for the Entities in PDB 1PKG

Entity #1 | Chains: A,B
c-kit protein protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 12059
95 % 7 7 7664 Flexibility: Medium
Max RMSD: 5.8, Avg RMSD: 3.5
PDBFlex
90 % 7 7 7609
70 % 7 7 7411
50 % 133 141 196
40 % 997 1067 6
30 % 3608 3912 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures