Sequence Similarity Clusters for the Entities in PDB 1PKD

Entity #1 | Chains: A,C
Cell division protein kinase 2 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 283 361 19
95 % 293 376 27
90 % 293 376 28
70 % 293 376 38
50 % 309 401 50
40 % 322 457 32
30 % 2159 3551 2
Entity #2 | Chains: B,D
Cyclin A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 86 135
95 % 47 105 141
90 % 51 109 146
70 % 51 109 166
50 % 51 109 195
40 % 51 109 213
30 % 54 115 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.