Sequence Similarity Clusters for the Entities in PDB 1PKD

Entity #1 | Chains: A,C
Cell division protein kinase 2 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 283 364 21
95 % 293 379 34
90 % 293 379 35
70 % 293 379 41
50 % 309 404 58
40 % 322 460 46
30 % 2338 3805 2
Entity #2 | Chains: B,D
Cyclin A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 86 160
95 % 47 105 148
90 % 51 109 154
70 % 51 109 172
50 % 51 109 208
40 % 51 109 230
30 % 54 115 229

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.