Sequence Similarity Clusters for the Entities in PDB 1PKD

Entity #1 | Chains: A,C
Cell division protein kinase 2 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 283 362 20
95 % 293 377 30
90 % 293 377 32
70 % 293 377 41
50 % 309 402 54
40 % 322 458 33
30 % 2223 3641 2
Entity #2 | Chains: B,D
Cyclin A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 87 141
95 % 47 106 145
90 % 51 110 149
70 % 51 110 170
50 % 51 110 199
40 % 51 110 220
30 % 54 116 220

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.