Sequence Similarity Clusters for the Entities in PDB 1PK9

Entity #1 | Chains: A,B,C
Purine nucleoside phosphorylase protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 23 302
95 % 10 32 266 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.9
PDBFlex
90 % 11 33 269
70 % 13 36 260
50 % 27 78 173
40 % 28 82 170
30 % 97 224 31

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures