Sequence Similarity Clusters for the Entities in PDB 1PK6

Entity #1 | Chains: A
Complement C1q subcomponent, A chain precursor protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 7322
95 % 2 5 7895 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 5 7845
70 % 2 5 7614
50 % 2 5 7001
40 % 4 15 2194
30 % 14 32 800
Entity #2 | Chains: B
Complement C1q subcomponent, B chain precursor protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 7319
95 % 2 5 7891
90 % 2 5 7841
70 % 2 5 7609
50 % 3 10 3489
40 % 5 15 2194
30 % 15 32 800
Entity #3 | Chains: C
Complement C1q subcomponent, C chain precursor protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 7325
95 % 2 5 7900
90 % 2 5 7850
70 % 2 5 7619
50 % 4 10 3489
40 % 6 15 2194
30 % 16 32 800

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.