Sequence Similarity Clusters for the Entities in PDB 1PK5

Entity #1 | Chains: A,B
Orphan nuclear receptor NR5A2 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27770
95 % 1 3 14532 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 12 17 2285
70 % 12 17 2280
50 % 17 24 1683
40 % 17 25 1646
30 % 654 1006 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures