Sequence Similarity Clusters for the Entities in PDB 1PK5

Entity #1 | Chains: A,B
Orphan nuclear receptor NR5A2 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27202
95 % 1 3 14269 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 12 17 2230
70 % 12 17 2218
50 % 17 24 1638
40 % 17 25 1606
30 % 645 992 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.