Sequence Similarity Clusters for the Entities in PDB 1PK1

Entity #1 | Chains: A,C
Polyhomeotic-proximal chromatin protein protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44268
95 % 2 2 22736
90 % 2 2 22025
70 % 2 2 20170
50 % 2 4 4289
40 % 3 6 2960
30 % 4 12 1403
Entity #2 | Chains: B,D
Sex comb on midleg CG9495-PA protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44269
95 % 2 2 13866
90 % 2 2 13612
70 % 2 2 12760
50 % 2 2 11410
40 % 4 6 2960
30 % 5 12 1403

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.