Sequence Similarity Clusters for the Entities in PDB 1PK1

Entity #1 | Chains: A,C
Polyhomeotic-proximal chromatin protein protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44979
95 % 2 2 23109
90 % 2 2 22385
70 % 2 2 20495
50 % 2 4 4361
40 % 3 6 3005
30 % 4 12 1424
Entity #2 | Chains: B,D
Sex comb on midleg CG9495-PA protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44980
95 % 2 2 14081
90 % 2 2 13821
70 % 2 2 12955
50 % 2 2 11570
40 % 4 6 3005
30 % 5 12 1424

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.