Sequence Similarity Clusters for the Entities in PDB 1PK0

Entity #1 | Chains: A,B,C
Calmodulin-sensitive adenylate cyclase protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 3332
95 % 6 7 3639 Flexibility: Low
Max RMSD: 10.0, Avg RMSD: 2.2
PDBFlex
90 % 6 7 3701
70 % 6 7 3646
50 % 6 7 3547
40 % 6 7 3407
30 % 6 7 3138
Entity #2 | Chains: D,E,F
Calmodulin protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 128 192 62
95 % 134 199 75 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.7
PDBFlex
90 % 147 212 77
70 % 148 214 93
50 % 166 247 106
40 % 226 370 43
30 % 284 443 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures