Sequence Similarity Clusters for the Entities in PDB 1PK0

Entity #1 | Chains: A,B,C
Calmodulin-sensitive adenylate cyclase protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 2731
95 % 6 7 3381 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 6 7 3432
70 % 6 7 3383
50 % 6 7 3301
40 % 6 7 3213
30 % 6 7 3008
Entity #2 | Chains: D,E,F
Calmodulin protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 106 149 96
95 % 128 186 82 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 141 199 81
70 % 142 201 96
50 % 160 234 106
40 % 220 357 41
30 % 241 384 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures