Sequence Similarity Clusters for the Entities in PDB 1PK0

Entity #1 | Chains: A,B,C
Calmodulin-sensitive adenylate cyclase protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 3235
95 % 6 7 3543 Flexibility: Low
Max RMSD: 10.0, Avg RMSD: 2.2
PDBFlex
90 % 6 7 3611
70 % 6 7 3556
50 % 6 7 3461
40 % 6 7 3317
30 % 6 7 3064
Entity #2 | Chains: D,E,F
Calmodulin protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 125 186 61
95 % 128 190 80 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.7
PDBFlex
90 % 141 203 77
70 % 142 205 93
50 % 160 238 106
40 % 220 361 41
30 % 276 432 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures