Sequence Similarity Clusters for the Entities in PDB 1PK0

Entity #1 | Chains: A,B,C
Calmodulin-sensitive adenylate cyclase protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 3427
95 % 6 7 3733 Flexibility: Low
Max RMSD: 10.0, Avg RMSD: 2.2
PDBFlex
90 % 6 7 3793
70 % 6 7 3727
50 % 6 7 3606
40 % 6 7 3454
30 % 6 7 3180
Entity #2 | Chains: D,E,F
Calmodulin protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 128 194 80
95 % 134 201 78 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.7
PDBFlex
90 % 147 214 79
70 % 148 216 97
50 % 166 249 110
40 % 226 372 47
30 % 285 451 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures