Sequence Similarity Clusters for the Entities in PDB 1PK0

Entity #1 | Chains: A,B,C
Calmodulin-sensitive adenylate cyclase protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 2695
95 % 6 7 3333 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 6 7 3379
70 % 6 7 3334
50 % 6 7 3247
40 % 6 7 3166
30 % 6 7 2959
Entity #2 | Chains: D,E,F
Calmodulin protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 98 139 103
95 % 120 176 90 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 133 189 87
70 % 134 191 103
50 % 152 224 113
40 % 212 347 41
30 % 233 374 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures