Sequence Similarity Clusters for the Entities in PDB 1PJN

Entity #1 | Chains: A
Histone-binding protein N1/N2 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74568
95 % 1 1 52148
90 % 1 1 49491
70 % 1 1 43364
50 % 1 1 37042
40 % 1 1 32712
30 % 1 1 27807
Entity #2 | Chains: B
Importin alpha-2 subunit protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 64 542
95 % 56 64 738 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.6
PDBFlex
90 % 62 72 632
70 % 62 72 677
50 % 76 95 440
40 % 78 99 459
30 % 78 99 458

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.