Sequence Similarity Clusters for the Entities in PDB 1PJM

Entity #1 | Chains: A
Retinoblastoma-associated protein protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71194
95 % 1 1 49734
90 % 1 1 47271
70 % 1 1 41607
50 % 1 1 35687
40 % 1 1 31552
30 % 1 1 26825
Entity #2 | Chains: B
Importin alpha-2 subunit protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 62 526
95 % 53 62 737
90 % 59 70 614
70 % 59 70 647
50 % 72 91 459
40 % 74 94 482
30 % 74 94 480

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.