Sequence Similarity Clusters for the Entities in PDB 1PJM

Entity #1 | Chains: A
Retinoblastoma-associated protein protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68533
95 % 1 1 47913
90 % 1 1 45595
70 % 1 1 40217
50 % 1 1 34510
40 % 1 1 30502
30 % 1 1 25925
Entity #2 | Chains: B
Importin alpha-2 subunit protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 59 471
95 % 50 59 684
90 % 56 67 537
70 % 56 67 588
50 % 68 86 416
40 % 70 89 439
30 % 70 89 444

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.