Sequence Similarity Clusters for the Entities in PDB 1PJM

Entity #1 | Chains: A
Retinoblastoma-associated protein protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66637
95 % 1 1 46637
90 % 1 1 44403
70 % 1 1 39225
50 % 1 1 33689
40 % 1 1 29809
30 % 1 1 25333
Entity #2 | Chains: B
Importin alpha-2 subunit protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 55 504
95 % 47 55 715
90 % 53 63 573
70 % 53 63 625
50 % 65 82 416
40 % 67 85 438
30 % 67 85 443

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.