Sequence Similarity Clusters for the Entities in PDB 1PJM

Entity #1 | Chains: A
Retinoblastoma-associated protein protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67501
95 % 1 1 47222
90 % 1 1 44945
70 % 1 1 39660
50 % 1 1 34052
40 % 1 1 30110
30 % 1 1 25602
Entity #2 | Chains: B
Importin alpha-2 subunit protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 58 481
95 % 49 58 692
90 % 55 66 543
70 % 55 66 592
50 % 67 85 412
40 % 69 88 434
30 % 69 88 438

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.