Sequence Similarity Clusters for the Entities in PDB 1PJM

Entity #1 | Chains: A
Retinoblastoma-associated protein protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66991
95 % 1 1 46873
90 % 1 1 44629
70 % 1 1 39414
50 % 1 1 33849
40 % 1 1 29943
30 % 1 1 25448
Entity #2 | Chains: B
Importin alpha-2 subunit protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 56 507
95 % 48 56 712
90 % 54 64 571
70 % 54 64 623
50 % 66 83 418
40 % 68 86 435
30 % 68 86 439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.