Sequence Similarity Clusters for the Entities in PDB 1PJK

Entity #1 | Chains: A
Casein kinase II, alpha chain protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 46 62 412
95 % 77 97 249 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 77 97 259
70 % 118 143 178
50 % 123 149 213
40 % 123 149 237
30 % 2594 4118 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures