Sequence Similarity Clusters for the Entities in PDB 1PJK

Entity #1 | Chains: A
Casein kinase II, alpha chain protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 49 65 410
95 % 108 129 167 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.9
PDBFlex
90 % 108 129 175
70 % 151 177 158
50 % 156 183 187
40 % 156 183 199
30 % 2775 4337 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures