Sequence Similarity Clusters for the Entities in PDB 1PJE

Entity #1 | Chains: A
VPU protein protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 16269
95 % 4 6 13605
90 % 4 6 13391
70 % 4 6 12586
50 % 4 6 11225
40 % 4 6 10188
30 % 4 6 8889

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures