Sequence Similarity Clusters for the Entities in PDB 1PJE

Entity #1 | Chains: A
VPU protein protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 16839
95 % 4 6 14033
90 % 4 6 13807
70 % 4 6 12957
50 % 4 6 11552
40 % 4 6 10468
30 % 4 6 9132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures