Sequence Similarity Clusters for the Entities in PDB 1PJB

Entity #1 | Chains: A
L-ALANINE DEHYDROGENASE protein, length: 361 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25739
95 % 3 3 21753 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 3 3 21139
70 % 3 3 19409
50 % 7 12 1495
40 % 7 12 1516
30 % 14 38 548

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.