Sequence Similarity Clusters for the Entities in PDB 1PJB

Entity #1 | Chains: A
L-ALANINE DEHYDROGENASE protein, length: 361 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26089
95 % 3 3 22038 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 3 3 21414
70 % 3 3 19658
50 % 7 12 1524
40 % 7 12 1538
30 % 14 38 554

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures