Sequence Similarity Clusters for the Entities in PDB 1PJB

Entity #1 | Chains: A
L-ALANINE DEHYDROGENASE protein, length: 361 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26542
95 % 3 3 22374 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 3 3 21724
70 % 3 3 19936
50 % 7 12 1544
40 % 7 12 1560
30 % 14 38 560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures