Sequence Similarity Clusters for the Entities in PDB 1PJ8

Entity #1 | Chains: A
Proteinase K protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 69 82 452
95 % 71 85 538 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 71 85 565
70 % 71 85 604
50 % 76 92 563
40 % 187 234 201
30 % 195 249 205
Entity #2 | Chains: I
6-residue peptide (N-Ac-PAPFPA-NH2) protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures