Sequence Similarity Clusters for the Entities in PDB 1PJ8

Entity #1 | Chains: A
Proteinase K protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 34 1199
95 % 71 80 573 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 71 80 605
70 % 71 80 641
50 % 76 87 569
40 % 186 227 193
30 % 193 241 190
Entity #2 | Chains: I
6-residue peptide (N-Ac-PAPFPA-NH2) protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.