Sequence Similarity Clusters for the Entities in PDB 1PJ4

Entity #1 | Chains: A,B,C,D
NAD-dependent malic enzyme, mitochondrial protein, length: 564 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 1070
95 % 7 10 1269 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 7 10 1294
70 % 7 10 1324
50 % 8 15 869
40 % 8 15 902
30 % 8 15 885

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures