Sequence Similarity Clusters for the Entities in PDB 1PJ3

Entity #1 | Chains: A,B,C,D
NAD-dependent malic enzyme, mitochondrial protein, length: 564 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 969
95 % 1 10 1177 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 1 10 1206
70 % 1 10 1243
50 % 1 15 806
40 % 1 15 842
30 % 1 15 827

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.