Sequence Similarity Clusters for the Entities in PDB 1PIV

Entity #1 | Chains: 0
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 12251
95 % 6 9 7685 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 6 9 7631
70 % 19 36 1531
50 % 24 42 1346
40 % 77 159 276
30 % 77 159 285
Entity #3 | Chains: 2
POLIOVIRUS TYPE 3 (SUBUNIT VP2) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10346
95 % 6 9 7712 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 6 9 7661
70 % 23 48 1137
50 % 72 159 306
40 % 72 159 317
30 % 89 194 165
Entity #4 | Chains: 3
POLIOVIRUS TYPE 3 (SUBUNIT VP3) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10421
95 % 6 9 7764 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 6 9 7717
70 % 24 48 1140
50 % 77 168 243
40 % 77 170 260
30 % 95 209 148
Entity #5 | Chains: 4
POLIOVIRUS TYPE 3 (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 7514
95 % 6 9 8089 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 18 33 1712
70 % 36 87 567
50 % 64 122 436
40 % 65 123 463
30 % 65 123 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.