Sequence Similarity Clusters for the Entities in PDB 1PIV

Entity #1 | Chains: 0
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 11345
95 % 6 7 9578
90 % 6 7 9479
70 % 19 34 1532
50 % 24 40 1337
40 % 77 148 272
30 % 77 148 274
Entity #3 | Chains: 2
POLIOVIRUS TYPE 3 (SUBUNIT VP2) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 9604
95 % 6 7 9626
90 % 6 7 9525
70 % 23 46 1104
50 % 72 150 288
40 % 72 150 307
30 % 88 178 165
Entity #4 | Chains: 3
POLIOVIRUS TYPE 3 (SUBUNIT VP3) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 9677
95 % 6 7 9694
90 % 6 7 9588
70 % 24 46 1106
50 % 49 114 422
40 % 77 159 254
30 % 93 189 149
Entity #5 | Chains: 4
POLIOVIRUS TYPE 3 (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 10099
95 % 6 7 10095
90 % 18 31 1711
70 % 36 82 551
50 % 64 116 417
40 % 64 116 456
30 % 64 116 448

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.