Sequence Similarity Clusters for the Entities in PDB 1PIV

Entity #1 | Chains: 0
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 11853
95 % 6 9 7429 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 6 9 7382
70 % 19 36 1485
50 % 24 42 1307
40 % 78 155 275
30 % 78 155 282
Entity #3 | Chains: 2
POLIOVIRUS TYPE 3 (SUBUNIT VP2) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10027
95 % 6 9 7458 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 6 9 7414
70 % 23 48 1101
50 % 73 157 293
40 % 73 157 307
30 % 90 192 163
Entity #4 | Chains: 3
POLIOVIRUS TYPE 3 (SUBUNIT VP3) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10100
95 % 6 9 7510 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 6 9 7469
70 % 24 48 1104
50 % 78 164 240
40 % 78 166 256
30 % 96 203 147
Entity #5 | Chains: 4
POLIOVIRUS TYPE 3 (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 7287
95 % 6 9 7827 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 18 33 1656
70 % 36 87 539
50 % 65 122 418
40 % 66 123 445
30 % 66 123 443

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.