Sequence Similarity Clusters for the Entities in PDB 1PIV

Entity #1 | Chains: 0
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 3 (SUBUNIT VP1) protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 12038
95 % 6 9 7568
90 % 6 9 7521
70 % 19 36 1507
50 % 24 42 1328
40 % 77 155 276
30 % 77 155 284
Entity #3 | Chains: 2
POLIOVIRUS TYPE 3 (SUBUNIT VP2) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 10179
95 % 6 9 7596
90 % 6 9 7552
70 % 23 48 1117
50 % 72 157 298
40 % 72 157 313
30 % 89 192 165
Entity #4 | Chains: 3
POLIOVIRUS TYPE 3 (SUBUNIT VP3) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 10253
95 % 6 9 7646
90 % 6 9 7606
70 % 24 48 1120
50 % 77 164 242
40 % 77 166 260
30 % 95 205 146
Entity #5 | Chains: 4
POLIOVIRUS TYPE 3 (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 9 7401
95 % 6 9 7966
90 % 18 33 1686
70 % 36 87 554
50 % 64 122 427
40 % 65 123 454
30 % 65 123 453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.