Sequence Similarity Clusters for the Entities in PDB 1PIL

Entity #1 | Chains: A
SIGNAL TRANSDUCING PROTEIN P2 protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29496
95 % 3 3 25762 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 3 3 24862
70 % 8 8 4373
50 % 48 51 357
40 % 55 58 319
30 % 55 58 325

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures