Sequence Similarity Clusters for the Entities in PDB 1PIF

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25169
95 % 13 17 2607 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 13 17 2653
70 % 67 77 580
50 % 69 81 591
40 % 76 90 565
30 % 76 90 565

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.