Sequence Similarity Clusters for the Entities in PDB 1PID

Entity #1 | Chains: A,C
DESPENTAPEPTIDE INSULIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 24 735
95 % 293 299 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 297 303 7
70 % 297 303 11
50 % 297 303 16
40 % 297 303 27
30 % 297 303 45
Entity #2 | Chains: B,D
DESPENTAPEPTIDE INSULIN protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 228 229 6
95 % 290 296 8 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 296 302 9
70 % 299 305 12
50 % 299 305 17
40 % 299 305 28
30 % 299 305 46

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures