Sequence Similarity Clusters for the Entities in PDB 1PID

Entity #1 | Chains: A,C
DESPENTAPEPTIDE INSULIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 24 731
95 % 290 296 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 294 300 8
70 % 294 300 11
50 % 294 300 16
40 % 294 300 25
30 % 294 300 44
Entity #2 | Chains: B,D
DESPENTAPEPTIDE INSULIN protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 225 226 7
95 % 287 293 8 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 293 299 9
70 % 296 302 12
50 % 296 302 17
40 % 296 302 26
30 % 296 302 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures