Sequence Similarity Clusters for the Entities in PDB 1PHN

Entity #1 | Chains: A
PHYCOCYANIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63907
95 % 2 3 23722 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 3 22945
70 % 6 36 282
50 % 6 42 283
40 % 8 54 58
30 % 20 143 17
Entity #2 | Chains: B
PHYCOCYANIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63027
95 % 2 3 23613 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 3 22838
70 % 6 39 281
50 % 13 62 38
40 % 13 87 24
30 % 21 143 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.