Sequence Similarity Clusters for the Entities in PDB 1PHN

Entity #1 | Chains: A
PHYCOCYANIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59980
95 % 2 3 22139
90 % 2 3 21439
70 % 6 29 381
50 % 6 35 397
40 % 6 44 287
30 % 16 118 127
Entity #2 | Chains: B
PHYCOCYANIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59129
95 % 2 3 22042
90 % 2 3 21342
70 % 6 32 379
50 % 11 52 231
40 % 11 72 194
30 % 17 118 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.