Sequence Similarity Clusters for the Entities in PDB 1PHN

Entity #1 | Chains: A
PHYCOCYANIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65181
95 % 2 3 24209 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 3 23395
70 % 6 36 295
50 % 6 42 295
40 % 8 54 64
30 % 20 143 18
Entity #2 | Chains: B
PHYCOCYANIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64292
95 % 2 3 24104 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 3 23290
70 % 6 39 294
50 % 13 62 40
40 % 13 87 30
30 % 21 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures