Sequence Similarity Clusters for the Entities in PDB 1PHN

Entity #1 | Chains: A
PHYCOCYANIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28263
95 % 2 3 24752 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 3 23918
70 % 6 37 300
50 % 6 43 308
40 % 8 55 85
30 % 20 145 16
Entity #2 | Chains: B
PHYCOCYANIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28264
95 % 2 3 24753 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 3 23919
70 % 6 40 299
50 % 13 63 40
40 % 13 88 34
30 % 21 145 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures